Home GlycoBase

The National Institute for Bioprocessing Research and Training (NIBRT)

Dublin-Oxford Glycobiology Laboratory (NIBRT/UCD)

PI: Prof. Pauline Rudd

GlycoBase: A novel database containing published details on 2-aminobenzamide (2AB) labelled released glycans. Each glycan entry is comprehenisvely annotated with a glucose unit (GU) value, MS composition, exoglycosidase digestion pathways, MS and MS/MS evidence together with each PubMed reference. Where glycans have been reported more than once, an average GU value is presented along with the standard deviation.

Name	Image	GU
M1		2.70
M2		3.46
F(6)M2		3.95
F(3)M2		4.29
M3		4.40
F(3)F(6)M2		4.76
F(6)M3		4.89
XM3		4.90
A1[6]		4.92
M3B		4.97
A1		4.97
A1[3]		5.03
M2A1G(4)1		5.06
A1B		5.31
M4		5.31
F(3)M3		5.33
A1[6]B		5.33
A1[3]B		5.33
F(6)M3B		5.40
F(6)A1[3]		5.40
A2		5.45
F(6)A1		5.44
XA1		5.50
F(6)M2A1[3]G(4)1S1		5.54
A1G1		5.66
F(6)M4		5.70
F(3)A1		5.74
F(6)F(3)M3		5.74
A2B		5.77
A1G(4)1		5.77
A1[6]G(4)1		5.83
A1[3]G(4)1		5.87
XA2		5.88
F(3)XM3		5.90
A3		5.90
F(6)A2		5.90
A3(2,2,6)		5.98
M4A1		6.00
M2A1[3]G(4)1S1		6.00
F(6)A1G1		6.10
A3B		6.13
F(6)A1G(4)1		6.19
M5		6.19
F(6)A2B		6.21
F(6)A1[6]G1		6.22
F(6)M4A1[3]		6.23
A2G1		6.24
F(3)F(6)A1		6.28
F(6)A3		6.28
F(3)A2		6.28
A2[6]G(4)1		6.30
A2[6]G1		6.30
F(6)A1[3]G1		6.30
F(6)A1[3]G(4)1		6.32
A2[3]G1		6.38
XA1F(4)1		6.39
F(6)A2GalNAc1		6.39
F(3)XA1		6.39
A2[6]BG(4)1		6.43
M4A1G(4)1		6.41
A2[3]G(4)1		6.46
A2G(4)1		6.44
A2[6]BG1		6.42
A2BG1		6.49
A2BG(4)1		6.52
A4		6.53
A2[3]BG(4)1		6.59
F(6)A1[3]G(4)1 + GlcNAc1		6.60
A1G(4)1S(6)1		6.60
M5A1		6.62
F(6)A2[6]G1		6.66
F(6)A2[6]G(4)1		6.64
F(6)A3B		6.67
A2[3]BG1		6.62
A3G(4)1		6.70
A1G1Ga1		6.71
F(3)F(6)A2		6.72
A4B		6.74
A3G1		6.76
F(6)A2G(4)1		6.76
F(6)A2[3]G(4)1		6.80
A1[3]G(4)1S(6)1		6.79
A1[6]G(4)1S(6)1		6.80
A1[6]G(4)1S(3)1		6.80
F(6)A2[3]G1		6.81
F(6)A2[6]BG(4)1		6.85
F(6)A4		6.85
F(3)XA2		6.85
F(3)XA1F(4)1		6.85
F(6)A2G1		6.87
A2[6]G(4)1S(6)1		6.88
F(6)A2BG1		6.88
F(6)A2BG(4)1		6.89
F(6)A2GalNAc2		6.92
F(6)A2[3]BG1		6.92
A1F(3)1G(4)1		6.93
M6 D2		6.96
A1[3]G(4)1S(3)1		6.96
F(6)A2[3]BG(4)1		6.96
A2G1S(6)1		6.97
F(6)A1[3]G(4)1S(6)1		7.02
F(6)A4B		7.06
M6 D3		7.06
A2G1S1		7.07
A2[6]G(4)1S(3)1		7.07
F(6)A1G1Ga1		7.08
A2F(3)1G(4)1		7.10
A2G2		7.11
F(3)F(6)A1G1		7.12
A2G(4)2		7.15
F(6)A2G(4)1GalNAc1		7.18
A2G1S(3)1		7.18
F(6)A2G(4)1F(2)1		7.18
A2G(4)1S(6)1		7.20
F(6)M4A1[3]G(4)1		7.20
A2[3]G(4)1S(3)1		7.20
F(6)A1G1S1		7.25
A2[3]G(4)1S(6)1		7.27
A2BG2		7.29
A2BG(4)2		7.29
XA2G(3)2		7.30
A4G(4)1		7.30
F(6)A1[3]G(4)1S(6)1 + GlcNAc1		7.33
F(6)A1G1S(3)1		7.36
A2F(3)1G(4)1S(6)1		7.36
A2G(4)1S1		7.37
A2BG(4)1S1		7.44
F(6)A2[6]BF(3)1G(4)1		7.46
A2G(4)1S(3)1		7.49
F(6)A2[3]BF(3)1G(4)1		7.50
F(6)A1G1S(6)1		7.50
F(6)A2G1Ga1		7.50
A3G(4)2		7.50
F(6)A2F(3)1G(4)1		7.50
F(6)A2G(4)1S1		7.50
M5A1G(4)1		7.51
A4G1		7.52
F(6)A2[6]G(4)1S(3)1		7.52
F(6)A2[6]BG(4)1S(6)1		7.52
F(6)A2[6]BG(4)1S(3)1		7.52
F(6)A2[6]G(4)1S(6)1		7.52
F(6)A3BG1		7.52
F(6)A2G2		7.55
F(6)A2G(4)1F(2)1GalNAc1		7.55
F(6)A2G(4)2		7.56
M4A1G(4)1S1		7.56
F(6)A2[3]BG(4)1S(3)1		7.59
F(6)A2[3]G(4)1S(3)1		7.59
F(6)A2[3]G(4)1S(6)1		7.59
F(6)A2[3]BG(4)1S(6)1		7.59
F(6)A2BF(3)1G(4)1		7.60
F(6)A1G(4)1S1		7.63
F(6)A2BG2		7.66
A4BG1		7.64
F(3)XA2G(3)1		7.65
A2G2S(6)1		7.70
F(6)A2BG(4)2		7.68
F(6)A2G(4)1S(6)1		7.67
A3G2		7.57
F(6)A2[3]F(3)1G(4)1		7.71
A2G(4)2S(6)1		7.72
F(6)A2G1S(3)1		7.73
A3F(3)1G(4)1		7.77
A2G2S(3)1		7.97
F(6)A2BG(4)1S1		7.82
M7 D3		7.82
A2G2S1		7.91
A2G(4)2S(3)1		7.82
F(6)A2G1S(6)1		7.85
F(6)A3G(4)2		7.85
F(6)A3G2		7.86
A4F(3)1G(4)1		7.86
A2BG2S1		8.03
F(6)M4A1[3]G(4)1S1		7.90
A2G2S(3)2		7.90
F(6)A2G2S(3)1		7.92
F(6)A2G(4)2F(2)1		7.95
M7		7.94
F(6)A4G1		7.94
F(6)A4BG1		7.94
A2F(3)1G(4)2		7.97
A2G(4)2S1		8.02
M7 D1		8.02
F(6)A2BG2S(3)1		8.03
F(6)A3BG(4)1		8.04
F(6)A2G(4)2S(6)1		8.13
A3BG2		8.04
F(6)A2G2S(6)1		8.13
F(6)A3BG2		8.15
A2BG(4)2S(3)1		8.16
F(6)A2G(4)1S1GalNAc1S1		8.18
A2BG(4)2S(6)1		8.18
A4G(4)2		8.20
A2BG2S2		8.67
A2BG(4)2S1		8.25
F(6)A2G(4)2F(2)2		8.24
F(6)A2G2S1		8.28
A2G2S(3,6)2		8.30
A3G3		8.31
A3G(4)3		8.33
F(6)A2G2Ga1		8.33
F(6)A3F(3)1G(4)1		8.34
F(6)A2F(3)1G(4)2		8.36
F(6)A2G(4)2S1		8.37
F(6)A2G(4)2S(3)1		8.11
F(6)A2G1Ga1S1		8.36
F(6)A2G2S(3)2		8.39
F(6)A2BG2S1		8.49
A2G2S2		8.51
F(6)A2F(3)2G(4)1		8.39
M5A1G(4)1S(6)1		8.41
A2G2S(6)2		8.45
A3BG3		8.45
A2[3]G(4)2S(6)2		8.51
F(3)XA2G(3)2		8.50
A2G(4)2S(3,6)2		8.63
F(6)A2BG(4)2S(6)1		8.51
F(6)A2BG(4)2S(3)1		8.52
F(3)F(6)A2BG2		8.53
F(6)A4G2		8.53
A2G(4)2S(3)2		8.61
A3G2S(6)1		8.54
A2F(3)1G(4)2S(6)1		8.56
F(6)A2BG2S(3)2		8.57
F(6)A4G(4)2		8.58
A3G2S(6)2		9.26
A3BG(4)3		8.57
F(6)A2BG(4)2S1		8.63
F(3)XA2F(4)1G(3)1		8.60
F(6)A3G3		8.62
M8 D2,D3		8.67
A4BG2		8.70
F(6)A3G(4)3		8.70
F(6)A2F(3)1G(4)2F(2)1		8.72
A2F(3)1G(4)2S(3)1		8.72
A2F(3)1G(4)2S1		8.72
A2G(4)2S2		8.78
A3F(3)2G(4)2		8.75
A3BG3S1		8.75
A3G3S(6)1		8.96
F(6)A2G2S2		8.88
F(6)A2G2S(3,6)2		8.78
A2F(3)2G(4)2		8.80
A4G3		8.81
M8		8.83
M8 D1,D3		8.84
F(6)A3G3S(6)1		8.89
A2F(3)1G(4)2S(6)2		8.91
F(6)A2G(4)2S(6)2		8.91
A3G(4)3S(6)1		8.93
A3G2S(3)2		8.93
A3G(4)3S(3)1		8.96
F(6)A3BG3		8.97
A3G3S(3)3		8.99
A3BG3S2		8.99
F(6)A4G3		8.99
F(6)A2BG(4)2S(6)2		9.02
F(6)A3G3S(3)1		9.02
A2BG(4)2S(3,6)2		9.04
A2BG(4)2S(6)2		9.04
A2BG(4)2S(3)2		9.04
F(6)A3BG(4)3		9.00
A3F(3)1G(4)3		9.06
F(6)A2G(4)2S2		9.12
F(6)A2G2Ga1S1		9.07
F(6)A2F(3)2G(4)2		9.12
A3BG(4)3S(3)1		9.08
A3BG(4)3S(6)1		9.08
F(6)A2G(4)2S(3)2		8.95
F(6)A2G(4)2S(3,6)2		9.05
A4F(3)2G(4)2		9.10
F(6)A2F(3)1G(4)2S1		9.14
F(6)A2F(3)1G(4)2F(2)2		9.12
F(6)A3G2S(6)2		9.13
F(6)A2BF(3)2G(4)2		9.14
F(6)A2BG(4)2S(3,6)2		9.17
F(6)A2BG(4)2S(3)2		9.17
F(6)A3G3S1		9.19
A2BG(4)2S2		9.19
A3G3S1		9.19
F(6)A3BG(4)3S(3)1		9.21
F(6)A3G(4)3S(3)1		9.21
F(6)A3BG(4)3S(6)1		9.21
F(6)A3G(4)3S(6)1		9.21
F(6)A2BG2S(6)2		9.26
A3G3S(3,6)2		9.27
F(6)A2G2Ga1S2		9.28
F(6)A2G2S(6)2		9.30
F(6)A4G(4)3		9.31
A3G3S(6)2		9.53
A3G3S(6)3		9.32
F(6)A2BG(4)2S2		9.42
A3G(4)3S(6)2		9.39
M9		9.49
F(3)F(6)A3G3		9.49
A4BG3		9.50
A3G(4)3S(3,6)2		9.51
F(6)A3G3S(6)2		9.52
F(6)A2F(3)2G(4)2F(2)1		9.63
A3G3S2		9.57
A4G4		9.59
A2F(3)1G(4)2S2		9.60
F(6)A3F(3)2G(4)2		9.65
F(6)A3F(3)1G(4)3		9.65
A3BG(4)3S(3,6)2		9.67
A3BG(4)3S(3)2		9.67
A4G(4)4		9.58
A3BG(4)3S(6)2		9.67
A3G(4)3S(3)2		9.67
A3G3S(3,3,6)3		9.71
A3F(3)1G(4)3S1		9.74
A4BG(4)4		9.75
F(6)A3G3S3		9.77
A3G(4)3S2		9.80
A3G3S(3,6,6)3		9.82
F(6)A4BG3		9.86
A3F(3)2G(4)3		9.88
F(6)A3G3S(3,6,6)3		9.89
A4BG4		9.89
F(6)A3G(4)3S(3)2		9.95
F(6)A3BG(4)3S(3,6)2		9.95
F(6)A3G(4)3S(3,6)2		9.95
F(6)A3G(4)3S(6)2		9.95
F(6)A3BG(4)3S(3)2		9.95
F(6)A3BG(4)3S(6)2		9.95
F(6)A4G(4)4		9.97
F(6)A4BG(4)3		9.98
F(6)A3G(4)3S(3,3,6)3		9.99
F(6)A4BG4		10.00
F(6)A4G4S1		10.00
F(6)A2F(3)2G(4)2F(2)2		10.03
A3F(3)1G(4)3S(3,3,6)3		10.03
F(6)A4G4		10.03
A3G3S3		10.07
A3BG(4)3S3		10.09
A3G(4)3S(6)3		10.09
A3G(4)3S3		10.05
A3F(3)1G(4)3S(3,6)2		10.12
A4G(4)4S(6)1		10.20
M9Glc1		10.21
A3F(3)1G(4)3S(6)2		10.22
F(6)A3F(3)2G(4)3		10.32
A4G(4)4S(6)2		10.32
F(6)A4BG(4)4		10.36
A4F(3)1G(4)4		10.37
F(6)A3G(4)3S3		10.40
F(6)A3G3S2		10.44
F(3)XA2F(4)1G(3)2		10.46
F(6)A3BG(4)3S3		10.49
A3F(3)1G(4)3S(6)3		10.50
A4G(4)4S3		10.50
A4G(4)3S(6)3		10.50
A3F(3)1G(4)3S(3,6,6)3		10.50
F(6)A3F(3)1G(4)3S2		10.60
F(6)A4BF(3)1G(4)3		10.76
F(6)A4F(3)1G(4)4		10.89
A3F(3)2G(4)3S1		10.86
A4G4S4		10.88
A4G(4)4S(3,?,?,?)4		10.88
A4F(3)2G(4)4		11.04
A4G(4)4S(6,6,6,3)4		11.15
F(6)A3F(3)2G(4)3S1		11.20
A4BG(4)4S4		11.29
F(6)A4G(4)4S4		11.29
A4G(4)4S(6)4		11.29
F(6)A4F(3)2G(4)3		11.36
F(6)A3F(3)3G(4)3		11.50
A4F(3)1G(4)4S4		11.62
A4G(4)4LacS4		11.78
A4F(3)2G(4)4S4		11.90